Motif 6

Information for 6-CACACCCC (Motif 6)

Reverse Opposite:

p-value:	1e0
log p-value:	-1.909e+00
Information Content per bp:	1.530
Number of Target Sequences with motif	7.0
Percentage of Target Sequences with motif	16.67%
Number of Background Sequences with motif	3569.1
Percentage of Background Sequences with motif	10.54%
Average Position of motif in Targets	121.8 +/- 47.6bp
Average Position of motif in Background	81.4 +/- 285.9bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	8.86
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

AFT2/MA0270.1/Jaspar

Match Rank:	1
Score:	0.91
Offset:	0
Orientation:	forward strand
Alignment:	CACACCCC CACACCCC

MET31(MacIsaac)/Yeast

Match Rank:	2
Score:	0.77
Offset:	-2
Orientation:	reverse strand
Alignment:	--CACACCCC GCCACACC--

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:	3
Score:	0.74
Offset:	1
Orientation:	reverse strand
Alignment:	CACACCCC -GCACCC-

ADR1/MA0268.1/Jaspar

Match Rank:	4
Score:	0.69
Offset:	3
Orientation:	forward strand
Alignment:	CACACCCC-- ---ACCCCAC

MSN2/MA0341.1/Jaspar

Match Rank:	5
Score:	0.68
Offset:	4
Orientation:	reverse strand
Alignment:	CACACCCC- ----CCCCT

AFT2(MacIsaac)/Yeast

Match Rank:	6
Score:	0.68
Offset:	0
Orientation:	forward strand
Alignment:	CACACCCC TGCACCC-

ADR1/Literature(Harbison)/Yeast

Match Rank:	7
Score:	0.68
Offset:	3
Orientation:	reverse strand
Alignment:	CACACCCC- ---ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:	8
Score:	0.68
Offset:	3
Orientation:	reverse strand
Alignment:	CACACCCC- ---ACCCCN

MIG1/MA0337.1/Jaspar

Match Rank:	9
Score:	0.68
Offset:	3
Orientation:	forward strand
Alignment:	CACACCCC-- ---CCCCCGC

MSN4/MA0342.1/Jaspar

Match Rank:	10
Score:	0.66
Offset:	4
Orientation:	reverse strand
Alignment:	CACACCCC- ----CCCCT