Information for 2-VGGTTCGA (Motif 2)

T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A C G T A A G T C G A T C A T G C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.873
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif26.19%
Number of Background Sequences with motif659.9
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets118.7 +/- 50.0bp
Average Position of motif in Background99.4 +/- 85.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:VGGTTCGA
-GATTCGA
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
A C G T A C T G C T A G A C G T A C G T A G T C A C T G C G T A

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:VGGTTCGA
CGGTTCG-
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
A G T C A C T G C A T G A C G T A C G T A G T C A T C G A C G T

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:VGGTTCGA
CGGTTCG-
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
A G T C A C T G A C T G A C G T A C G T A G T C A T C G A C G T

YER051W(MacIsaac)/Yeast

Match Rank:4
Score:0.80
Offset:3
Orientation:forward strand
Alignment:VGGTTCGA-
---TTCGAA
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T
A C G T A C G T A C G T C G A T A C G T G T A C A C T G C G T A C G T A

XBP1/MA0414.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:VGGTTCGA-
--NCTCGAG
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T
A C G T A C G T A G C T A G T C A C G T A G T C A C T G C G T A C T A G

XBP1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:VGGTTCGA-
--CTTCGAG
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T
A C G T A C G T A G T C A C G T A C G T A G T C A C T G C G T A A C T G

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-VGGTTCGA
TCGGNNCGA
 A C G T T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
A C G T A G T C A C T G A C T G A C G T A C G T A G T C A C T G C G T A

STB4(MacIsaac)/Yeast

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-VGGTTCGA
TCGGNNCGA
 A C G T T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A
A C G T A G T C A C T G A C T G A C G T A C G T A G T C A C T G C G T A

HSF1/MA0319.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:VGGTTCGA-
-TGTTCCAT
 T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T
A C G T G A C T T A C G A C G T A C G T A G T C A G T C C G T A A C G T

SNF1(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--VGGTTCGA-------
CCGGGTTCGATCCCCGG
 A C G T A C G T T A C G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A G T C A C T G C T A G A C T G A C G T A C G T A G T C A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C T G A C T G